Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.81□□□□□ -0.04
ABCD3P28288 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 AL603832.2-201ENST00000566195 2125 ntBASIC14.81□□□□□ -0.04
ABCD3P28288 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.81□□□□□ -0.04
ABCD3P28288 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
ABCD3P28288 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.81□□□□□ -0.04
ABCD3P28288 BNIP3P1-202ENST00000550043 1585 ntBASIC14.81□□□□□ -0.04
ABCD3P28288 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ABCD3P28288 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 CDC14C-201ENST00000428251 1719 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 AC069224.1-201ENST00000566372 1715 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
ABCD3P28288 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
ABCD3P28288 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 PCDHA1-201ENST00000378133 2726 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ABCD3P28288 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 LINC02447-202ENST00000501888 2146 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.8□□□□□ -0.04
ABCD3P28288 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ABCD3P28288 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.8□□□□□ -0.04
ABCD3P28288 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ABCD3P28288 RPL37AP1-201ENST00000412502 279 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 AL080243.2-201ENST00000418783 582 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.8□□□□□ -0.04
ABCD3P28288 AC092580.3-201ENST00000430932 139 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 AC055876.3-201ENST00000431496 288 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
ABCD3P28288 IGHV3-42-201ENST00000520410 361 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 AC027369.6-201ENST00000525520 931 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.8□□□□□ -0.04
ABCD3P28288 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 AC138649.4-201ENST00000612222 287 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 KRT8P12-202ENST00000472924 1397 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.8□□□□□ -0.04
ABCD3P28288 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.8□□□□□ -0.04
ABCD3P28288 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.8□□□□□ -0.04
ABCD3P28288 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.8□□□□□ -0.04
ABCD3P28288 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
ABCD3P28288 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ABCD3P28288 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ABCD3P28288 LINC02199-201ENST00000506655 2702 ntBASIC14.79□□□□□ -0.04
ABCD3P28288 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ABCD3P28288 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.79□□□□□ -0.04
ABCD3P28288 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ABCD3P28288 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCD3P28288 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
ABCD3P28288 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCD3P28288 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ABCD3P28288 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCD3P28288 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ABCD3P28288 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.79□□□□□ -0.04
ABCD3P28288 AL390955.2-201ENST00000603032 514 ntBASIC14.79□□□□□ -0.04
ABCD3P28288 TEX28P1-201ENST00000613479 1221 ntBASIC14.79□□□□□ -0.04
ABCD3P28288 TEX28P2-201ENST00000617764 1221 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms