Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.7■□□□□ 0.42
SMPD1P17405 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SMPD1P17405 AC009486.1-201ENST00000569860 813 ntBASIC17.7■□□□□ 0.42
SMPD1P17405 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.7■□□□□ 0.42
SMPD1P17405 AC000095.1-201ENST00000603208 874 ntBASIC17.7■□□□□ 0.42
SMPD1P17405 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.7■□□□□ 0.42
SMPD1P17405 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMPD1P17405 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SMPD1P17405 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMPD1P17405 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.7■□□□□ 0.42
SMPD1P17405 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMPD1P17405 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.7■□□□□ 0.42
SMPD1P17405 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMPD1P17405 AC134312.5-201ENST00000568031 1313 ntBASIC17.7■□□□□ 0.42
SMPD1P17405 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SMPD1P17405 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SMPD1P17405 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMPD1P17405 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SMPD1P17405 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMPD1P17405 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.69■□□□□ 0.42
SMPD1P17405 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SMPD1P17405 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.69■□□□□ 0.42
SMPD1P17405 AC012441.1-201ENST00000446669 685 ntBASIC17.69■□□□□ 0.42
SMPD1P17405 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.69■□□□□ 0.42
SMPD1P17405 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 RNA5SP412-201ENST00000516234 123 ntBASIC17.69■□□□□ 0.42
SMPD1P17405 FAM8A2P-201ENST00000528813 1142 ntBASIC17.69■□□□□ 0.42
SMPD1P17405 RN7SL219P-201ENST00000582872 296 ntBASIC17.69■□□□□ 0.42
SMPD1P17405 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.69■□□□□ 0.42
SMPD1P17405 MIR6869-201ENST00000619434 62 ntBASIC17.69■□□□□ 0.42
SMPD1P17405 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMPD1P17405 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SMPD1P17405 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMPD1P17405 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.68■□□□□ 0.42
SMPD1P17405 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SMPD1P17405 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.68■□□□□ 0.42
SMPD1P17405 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.68■□□□□ 0.42
SMPD1P17405 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.68■□□□□ 0.42
SMPD1P17405 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 AC106760.1-201ENST00000508690 800 ntBASIC17.68■□□□□ 0.42
SMPD1P17405 AP001063.1-201ENST00000568332 529 ntBASIC17.68■□□□□ 0.42
SMPD1P17405 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMPD1P17405 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.68■□□□□ 0.42
SMPD1P17405 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.68■□□□□ 0.42
SMPD1P17405 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.68■□□□□ 0.42
SMPD1P17405 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.68■□□□□ 0.42
SMPD1P17405 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.68■□□□□ 0.42
SMPD1P17405 GPR182-203ENST00000622922 591 ntBASIC17.68■□□□□ 0.42
SMPD1P17405 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.68■□□□□ 0.42
SMPD1P17405 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SMPD1P17405 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.68■□□□□ 0.42
SMPD1P17405 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 TUBB1P2-201ENST00000422712 1306 ntBASIC17.68■□□□□ 0.42
SMPD1P17405 TUBB1P1-201ENST00000503144 1300 ntBASIC17.68■□□□□ 0.42
SMPD1P17405 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMPD1P17405 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
SMPD1P17405 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.67■□□□□ 0.42
SMPD1P17405 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMPD1P17405 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SMPD1P17405 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMPD1P17405 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms