Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.24■□□□□ 0.03
NCK1P16333 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.24■□□□□ 0.03
NCK1P16333 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.24■□□□□ 0.03
NCK1P16333 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.24■□□□□ 0.03
NCK1P16333 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 AC009090.5-201ENST00000624886 2285 ntBASIC15.24■□□□□ 0.03
NCK1P16333 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.24■□□□□ 0.03
NCK1P16333 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NCK1P16333 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NCK1P16333 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.23■□□□□ 0.03
NCK1P16333 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NCK1P16333 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NCK1P16333 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 RNU1-129P-201ENST00000384064 167 ntBASIC15.23■□□□□ 0.03
NCK1P16333 AC073621.1-201ENST00000392730 636 ntBASIC15.23■□□□□ 0.03
NCK1P16333 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.23■□□□□ 0.03
NCK1P16333 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 SCARNA2-201ENST00000458748 420 ntBASIC15.23■□□□□ 0.03
NCK1P16333 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.23■□□□□ 0.03
NCK1P16333 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 U1.21-201ENST00000580816 167 ntBASIC15.23■□□□□ 0.03
NCK1P16333 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.23■□□□□ 0.03
NCK1P16333 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.23■□□□□ 0.03
NCK1P16333 AC107918.4-202ENST00000641623 219 ntBASIC15.23■□□□□ 0.03
NCK1P16333 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 C18orf15-201ENST00000623680 2534 ntBASIC15.23■□□□□ 0.03
NCK1P16333 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 AC112693.3-201ENST00000624819 1983 ntBASIC15.23■□□□□ 0.03
NCK1P16333 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.23■□□□□ 0.03
NCK1P16333 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.23■□□□□ 0.03
NCK1P16333 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCK1P16333 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.22■□□□□ 0.03
NCK1P16333 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.22■□□□□ 0.03
NCK1P16333 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 AC026748.1-201ENST00000624349 3251 ntBASIC15.22■□□□□ 0.03
NCK1P16333 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.22■□□□□ 0.03
NCK1P16333 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 AC021097.1-201ENST00000607902 574 ntBASIC15.22■□□□□ 0.03
NCK1P16333 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.22■□□□□ 0.03
NCK1P16333 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCK1P16333 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms