Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD48P09326 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD48P09326 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CD48P09326 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.64■□□□□ 0.26
CD48P09326 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CD48P09326 AC136621.1-201ENST00000624017 2304 ntBASIC16.64■□□□□ 0.25
CD48P09326 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.64■□□□□ 0.25
CD48P09326 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.64■□□□□ 0.25
CD48P09326 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CD48P09326 GPS2P2-201ENST00000430745 888 ntBASIC16.64■□□□□ 0.25
CD48P09326 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.64■□□□□ 0.25
CD48P09326 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 AC243562.2-201ENST00000561247 970 ntBASIC16.64■□□□□ 0.25
CD48P09326 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.64■□□□□ 0.25
CD48P09326 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.64■□□□□ 0.25
CD48P09326 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CD48P09326 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD48P09326 PPT1-215ENST00000641471 2368 ntBASIC16.64■□□□□ 0.25
CD48P09326 CYP4F24P-201ENST00000586049 1580 ntBASIC16.64■□□□□ 0.25
CD48P09326 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.63■□□□□ 0.25
CD48P09326 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 KRT18P32-201ENST00000424695 1287 ntBASIC16.63■□□□□ 0.25
CD48P09326 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 AC092865.5-201ENST00000545435 363 ntBASIC16.63■□□□□ 0.25
CD48P09326 MIR3687-2-201ENST00000577708 61 ntBASIC16.63■□□□□ 0.25
CD48P09326 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
CD48P09326 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 MIR3687-1-201ENST00000614492 61 ntBASIC16.63■□□□□ 0.25
CD48P09326 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.63■□□□□ 0.25
CD48P09326 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 REXO1L1P-202ENST00000608646 1974 ntBASIC16.63■□□□□ 0.25
CD48P09326 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.63■□□□□ 0.25
CD48P09326 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CD48P09326 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.63■□□□□ 0.25
CD48P09326 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 AC009090.5-201ENST00000624886 2285 ntBASIC16.62■□□□□ 0.25
CD48P09326 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 DBET-201ENST00000630918 3363 ntBASIC16.62■□□□□ 0.25
CD48P09326 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CD48P09326 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.62■□□□□ 0.25
CD48P09326 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CD48P09326 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.62■□□□□ 0.25
CD48P09326 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms