Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHRNA1P02708 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA1P02708 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHRNA1P02708 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA1P02708 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA1P02708 VDAC1P7-201ENST00000462417 847 ntBASIC17.32■□□□□ 0.36
CHRNA1P02708 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRNA1P02708 AP001889.1-201ENST00000525414 633 ntBASIC17.32■□□□□ 0.36
CHRNA1P02708 AC120045.2-201ENST00000567334 178 ntBASIC17.32■□□□□ 0.36
CHRNA1P02708 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA1P02708 AL022328.1-201ENST00000610050 478 ntBASIC17.32■□□□□ 0.36
CHRNA1P02708 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.32■□□□□ 0.36
CHRNA1P02708 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRNA1P02708 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHRNA1P02708 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRNA1P02708 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRNA1P02708 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA1P02708 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHRNA1P02708 FAM86MP-201ENST00000340703 885 ntBASIC17.31■□□□□ 0.36
CHRNA1P02708 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA1P02708 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CHRNA1P02708 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA1P02708 SOCS2P1-201ENST00000417727 557 ntBASIC17.31■□□□□ 0.36
CHRNA1P02708 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
CHRNA1P02708 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 KLF2P4-201ENST00000451959 1225 ntBASIC17.31■□□□□ 0.36
CHRNA1P02708 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CHRNA1P02708 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA1P02708 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.31■□□□□ 0.36
CHRNA1P02708 CLUHP6-201ENST00000580789 941 ntBASIC17.31■□□□□ 0.36
CHRNA1P02708 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 AC018892.3-201ENST00000623986 2499 ntBASIC17.31■□□□□ 0.36
CHRNA1P02708 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.31■□□□□ 0.36
CHRNA1P02708 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.31■□□□□ 0.36
CHRNA1P02708 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHRNA1P02708 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHRNA1P02708 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.3■□□□□ 0.36
CHRNA1P02708 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHRNA1P02708 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.3■□□□□ 0.36
CHRNA1P02708 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHRNA1P02708 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms