Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-CO1P00395 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-CO1P00395 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-CO1P00395 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-CO1P00395 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-CO1P00395 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-CO1P00395 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MT-CO1P00395 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MT-CO1P00395 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
MT-CO1P00395 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.49■□□□□ 0.23
MT-CO1P00395 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MT-CO1P00395 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 BASP1P1-201ENST00000430708 665 ntBASIC16.49■□□□□ 0.23
MT-CO1P00395 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.49■□□□□ 0.23
MT-CO1P00395 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.49■□□□□ 0.23
MT-CO1P00395 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.49■□□□□ 0.23
MT-CO1P00395 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 AL589739.1-201ENST00000607720 493 ntBASIC16.49■□□□□ 0.23
MT-CO1P00395 AL590560.3-201ENST00000623350 461 ntBASIC16.49■□□□□ 0.23
MT-CO1P00395 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.49■□□□□ 0.23
MT-CO1P00395 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.49■□□□□ 0.23
MT-CO1P00395 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MT-CO1P00395 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-CO1P00395 AC100757.3-201ENST00000622361 1406 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 LINC00554-201ENST00000564841 3011 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 UGT1A2P-201ENST00000454886 866 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 HLA-V-204ENST00000476601 1289 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-CO1P00395 RNA5SP421-201ENST00000516864 134 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.48■□□□□ 0.23
MT-CO1P00395 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 AL365330.1-201ENST00000607459 531 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.48■□□□□ 0.23
MT-CO1P00395 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MT-CO1P00395 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MT-CO1P00395 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.48■□□□□ 0.23
MT-CO1P00395 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 CYP2T1P-202ENST00000641596 2535 ntBASIC16.48■□□□□ 0.23
MT-CO1P00395 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MT-CO1P00395 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MT-CO1P00395 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms