Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE3O75131 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE3O75131 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE3O75131 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.49■□□□□ 0.07
CPNE3O75131 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CPNE3O75131 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CPNE3O75131 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.49■□□□□ 0.07
CPNE3O75131 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE3O75131 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
CPNE3O75131 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE3O75131 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE3O75131 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE3O75131 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.48■□□□□ 0.07
CPNE3O75131 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.48■□□□□ 0.07
CPNE3O75131 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CPNE3O75131 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE3O75131 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 TEX28P1-201ENST00000613479 1221 ntBASIC15.48■□□□□ 0.07
CPNE3O75131 TEX28P2-201ENST00000617764 1221 ntBASIC15.48■□□□□ 0.07
CPNE3O75131 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE3O75131 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE3O75131 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CPNE3O75131 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE3O75131 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CPNE3O75131 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE3O75131 AL589702.1-201ENST00000641229 1509 ntBASIC15.48■□□□□ 0.07
CPNE3O75131 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
CPNE3O75131 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CPNE3O75131 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CPNE3O75131 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE3O75131 MRPS18AP1-201ENST00000414458 589 ntBASIC15.47■□□□□ 0.07
CPNE3O75131 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE3O75131 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE3O75131 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE3O75131 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms