Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 RNF216P1-203ENST00000404404 2427 ntBASIC21.78■■□□□ 1.08
CHD2O14647 UBALD1-205ENST00000590891 2641 ntBASIC21.78■■□□□ 1.08
CHD2O14647 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHD2O14647 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHD2O14647 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHD2O14647 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 AC024681.1-201ENST00000521917 487 ntBASIC21.78■■□□□ 1.08
CHD2O14647 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD2O14647 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC21.78■■□□□ 1.08
CHD2O14647 AP001002.3-201ENST00000623482 206 ntBASIC21.78■■□□□ 1.08
CHD2O14647 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD2O14647 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD2O14647 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD2O14647 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD2O14647 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC21.77■■□□□ 1.08
CHD2O14647 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD2O14647 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CHD2O14647 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHD2O14647 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHD2O14647 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.76■■□□□ 1.07
CHD2O14647 RN7SL181P-201ENST00000462921 277 ntBASIC21.76■■□□□ 1.07
CHD2O14647 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC21.76■■□□□ 1.07
CHD2O14647 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHD2O14647 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHD2O14647 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CHD2O14647 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC21.76■■□□□ 1.07
CHD2O14647 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 GHSR-202ENST00000427970 912 ntBASIC21.76■■□□□ 1.07
CHD2O14647 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CHD2O14647 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.76■■□□□ 1.07
CHD2O14647 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CHD2O14647 AC100850.1-201ENST00000506768 649 ntBASIC21.76■■□□□ 1.07
CHD2O14647 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.76■■□□□ 1.07
CHD2O14647 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC21.76■■□□□ 1.07
CHD2O14647 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.76■■□□□ 1.07
CHD2O14647 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.76■■□□□ 1.07
CHD2O14647 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 CDK7-214ENST00000626796 358 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD2O14647 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD2O14647 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD2O14647 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHD2O14647 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.75■■□□□ 1.07
CHD2O14647 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CHD2O14647 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHD2O14647 KRT8P14-201ENST00000414254 1442 ntBASIC21.75■■□□□ 1.07
CHD2O14647 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD2O14647 AC022188.1-201ENST00000620960 1664 ntBASIC21.75■■□□□ 1.07
CHD2O14647 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD2O14647 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHD2O14647 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHD2O14647 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC21.75■■□□□ 1.07
CHD2O14647 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD2O14647 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHD2O14647 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD2O14647 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
CHD2O14647 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD2O14647 PDIA3P2-201ENST00000428073 158 ntBASIC21.75■■□□□ 1.07
CHD2O14647 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD2O14647 AC234782.1-201ENST00000451950 919 ntBASIC21.75■■□□□ 1.07
CHD2O14647 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.75■■□□□ 1.07
CHD2O14647 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CHD2O14647 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD2O14647 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms