Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.91■□□□□ 0.14
TLR4O00206 AC099568.2-201ENST00000609194 695 ntBASIC15.91■□□□□ 0.14
TLR4O00206 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.91■□□□□ 0.14
TLR4O00206 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TLR4O00206 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TLR4O00206 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TLR4O00206 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TLR4O00206 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.91■□□□□ 0.14
TLR4O00206 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TLR4O00206 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TLR4O00206 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TLR4O00206 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TLR4O00206 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TLR4O00206 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TLR4O00206 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.91■□□□□ 0.14
TLR4O00206 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.9■□□□□ 0.14
TLR4O00206 GGT3P-204ENST00000453783 1664 ntBASIC15.9■□□□□ 0.14
TLR4O00206 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.9■□□□□ 0.14
TLR4O00206 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TLR4O00206 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.9■□□□□ 0.14
TLR4O00206 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TLR4O00206 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TLR4O00206 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 IGHV3-71-201ENST00000523324 359 ntBASIC15.9■□□□□ 0.14
TLR4O00206 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.9■□□□□ 0.14
TLR4O00206 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TLR4O00206 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.9■□□□□ 0.14
TLR4O00206 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.89■□□□□ 0.13
TLR4O00206 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.89■□□□□ 0.13
TLR4O00206 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TLR4O00206 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.89■□□□□ 0.13
TLR4O00206 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.89■□□□□ 0.13
TLR4O00206 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.89■□□□□ 0.13
TLR4O00206 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 AL589987.1-201ENST00000453380 819 ntBASIC15.89■□□□□ 0.13
TLR4O00206 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 TIMM17BP1-201ENST00000545713 516 ntBASIC15.89■□□□□ 0.13
TLR4O00206 AC123567.1-201ENST00000548294 1261 ntBASIC15.89■□□□□ 0.13
TLR4O00206 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TLR4O00206 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.89■□□□□ 0.13
TLR4O00206 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 AC074044.1-201ENST00000609673 707 ntBASIC15.89■□□□□ 0.13
TLR4O00206 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.89■□□□□ 0.13
TLR4O00206 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TLR4O00206 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.89■□□□□ 0.13
TLR4O00206 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TLR4O00206 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms