Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 HLA-H-201ENST00000383620 1096 ntBASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CLCA3PQ9Y6N3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 AC063926.3-201ENST00000624734 5658 ntBASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 RNA5SP410-201ENST00000516285 106 ntBASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 AC024267.1-201ENST00000582320 895 ntBASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.27■□□□□ 0.04
CLCA3PQ9Y6N3 AL513523.2-202ENST00000427283 2040 ntBASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCA3PQ9Y6N3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 SPDYE7P-202ENST00000420373 878 ntBASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 RARRES2P9-201ENST00000565168 469 ntBASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 AP001059.3-201ENST00000619053 235 ntBASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCA3PQ9Y6N3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms