Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 RARRES2P9-201ENST00000565168 469 ntBASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 AL596442.2-201ENST00000610240 980 ntBASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 AL691403.2-201ENST00000618460 490 ntBASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 AC009093.7-201ENST00000623853 1223 ntBASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB13Q9Y5F0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AC010491.1-201ENST00000563101 2797 ntBASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AC092905.1-201ENST00000467527 949 ntBASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB13Q9Y5F0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 RPS8P6-201ENST00000426177 609 ntBASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 RBPMS2P1-201ENST00000437762 623 ntBASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB13Q9Y5F0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 AL603832.2-201ENST00000566195 2125 ntBASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
PCDHB13Q9Y5F0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms