Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 AC112504.1-201ENST00000623415 1841 ntBASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 CYP4F24P-201ENST00000586049 1580 ntBASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 AC092850.2-201ENST00000623821 2697 ntBASIC14.47□□□□□ -0.09
HDGFL3Q9Y3E1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 KRT18P28-201ENST00000453838 1332 ntBASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.46□□□□□ -0.09
HDGFL3Q9Y3E1 AL136982.4-201ENST00000437689 1740 ntBASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 AC022188.1-201ENST00000620960 1664 ntBASIC14.46□□□□□ -0.1
HDGFL3Q9Y3E1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 RN7SL828P-201ENST00000607615 303 ntBASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.45□□□□□ -0.1
HDGFL3Q9Y3E1 Z92544.3-201ENST00000624747 417 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms