Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AC027307.2-201ENST00000591252 911 ntBASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FNDC3AQ9Y2H6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 ME2P1-201ENST00000426028 1970 ntBASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 AP003680.1-201ENST00000598970 3660 ntBASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 MIR4453-201ENST00000584019 89 ntBASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 AC020765.3-201ENST00000613051 740 ntBASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
FNDC3AQ9Y2H6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 MIR346-201ENST00000362234 95 ntBASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 SERBP1P5-201ENST00000510079 1181 ntBASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 AC006449.5-201ENST00000610658 2098 ntBASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 AC008894.3-201ENST00000624324 3103 ntBASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.48■□□□□ 0.23
FNDC3AQ9Y2H6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FNDC3AQ9Y2H6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms