Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 TFAMP1-201ENST00000412727 736 ntBASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 BX842568.4-201ENST00000421222 227 ntBASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 RN7SL589P-201ENST00000481268 310 ntBASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 GRK6P1-201ENST00000400595 1711 ntBASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAPPC4Q9Y296 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 ELL2P1-201ENST00000413990 1906 ntBASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 UPF3AP3-201ENST00000420996 769 ntBASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 YBX1P5-201ENST00000509441 847 ntBASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 AC026120.1-201ENST00000611536 926 ntBASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAPPC4Q9Y296 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 U82695.1-201ENST00000635752 1889 ntBASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 AC005622.1-201ENST00000636801 1703 ntBASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAPPC4Q9Y296 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms