Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.38□□□□□ -0.11
FOXD3Q9UJU5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 AP005018.1-201ENST00000525475 301 ntBASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 CU639417.3-201ENST00000624240 1404 ntBASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FOXD3Q9UJU5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AL391825.1-201ENST00000457671 1364 ntBASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.36□□□□□ -0.11
FOXD3Q9UJU5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms