Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC093724.1-201ENST00000448659 1027 ntBASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 MEIS3P1-201ENST00000495167 958 ntBASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 TP53TG3HP-202ENST00000569755 579 ntBASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 AL132655.2-201ENST00000596276 594 ntBASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDAC6Q9UBN7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 GNAQP1-201ENST00000444815 1067 ntBASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 API5-211ENST00000534695 560 ntTSL 5 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 AC135586.1-201ENST00000539323 574 ntBASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 AL139011.1-202ENST00000642063 584 ntBASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 AC005052.1-201ENST00000625181 2492 ntBASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDAC6Q9UBN7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HDAC6Q9UBN7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDAC6Q9UBN7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms