Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 AP001282.1-201ENST00000531301 1499 ntBASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLCF1Q9UBD9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 HAUS4P1-201ENST00000406739 1145 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 DFFBP1-201ENST00000433250 979 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 GNAQP1-201ENST00000444815 1067 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AC093004.1-201ENST00000508850 424 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AP005018.1-201ENST00000525475 301 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AC005225.4-201ENST00000557330 545 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 SRD5A3P1-201ENST00000603021 949 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AC012645.4-201ENST00000610691 1061 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AC025048.6-201ENST00000634326 1161 ntBASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLCF1Q9UBD9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 BNIP3P1-202ENST00000550043 1585 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 AC006449.6-201ENST00000612330 2296 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 AC007541.1-201ENST00000570282 1469 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 SPDYE19P-201ENST00000338590 713 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 AZGP1P1-201ENST00000411909 902 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 AL353779.1-201ENST00000434793 351 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 API5-211ENST00000534695 560 ntTSL 5 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 TNRC18P3-201ENST00000441896 2691 ntBASIC14.26□□□□□ -0.13
CLCF1Q9UBD9 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLCF1Q9UBD9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms