Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AC112492.5-201ENST00000421897 457 ntBASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 ACA64.2-201ENST00000459014 129 ntBASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 FLJ38576-201ENST00000623820 2459 ntBASIC16.7■□□□□ 0.26
LRRC3Q9BY71 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRRC3Q9BY71 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 TARDBPP1-201ENST00000442013 1203 ntBASIC16.69■□□□□ 0.26
LRRC3Q9BY71 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 AC092552.1-201ENST00000547243 906 ntBASIC16.69■□□□□ 0.26
LRRC3Q9BY71 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 RPSAP52-203ENST00000622976 1023 ntBASIC16.69■□□□□ 0.26
LRRC3Q9BY71 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3Q9BY71 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC3Q9BY71 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms