Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 MIR4751-201ENST00000578027 74 ntBASIC9.67□□□□□ -0.86
LIMD2Q9BT23 AC020765.3-201ENST00000613051 740 ntBASIC9.67□□□□□ -0.86
LIMD2Q9BT23 AC010654.1-201ENST00000615722 808 ntBASIC9.67□□□□□ -0.86
LIMD2Q9BT23 AL773604.1-201ENST00000617417 272 ntBASIC9.67□□□□□ -0.86
LIMD2Q9BT23 AC012313.10-201ENST00000623509 926 ntBASIC9.67□□□□□ -0.86
LIMD2Q9BT23 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 AC092053.3-201ENST00000641308 4975 ntBASIC9.66□□□□□ -0.86
LIMD2Q9BT23 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 AC144831.1-201ENST00000573312 2656 ntBASIC9.66□□□□□ -0.86
LIMD2Q9BT23 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 AL450487.1-201ENST00000426799 995 ntBASIC9.66□□□□□ -0.86
LIMD2Q9BT23 KRT18P27-201ENST00000427733 1299 ntBASIC9.66□□□□□ -0.86
LIMD2Q9BT23 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 MOK-208ENST00000519058 917 ntTSL 2 BASIC9.66□□□□□ -0.86
LIMD2Q9BT23 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms