Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE1Q99829 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE1Q99829 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE1Q99829 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CPNE1Q99829 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 KRT18P2-201ENST00000447938 1258 ntBASIC16.09■□□□□ 0.17
CPNE1Q99829 AC074386.1-202ENST00000463561 864 ntBASIC16.09■□□□□ 0.17
CPNE1Q99829 AC098859.1-201ENST00000502915 1238 ntBASIC16.09■□□□□ 0.17
CPNE1Q99829 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE1Q99829 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE1Q99829 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
CPNE1Q99829 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE1Q99829 PDPK2P-202ENST00000562415 1191 ntBASIC16.09■□□□□ 0.17
CPNE1Q99829 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE1Q99829 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE1Q99829 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE1Q99829 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE1Q99829 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE1Q99829 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE1Q99829 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE1Q99829 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE1Q99829 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 AC105250.1-201ENST00000509378 2057 ntBASIC16.09■□□□□ 0.17
CPNE1Q99829 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE1Q99829 AC006486.2-201ENST00000624246 2199 ntBASIC16.09■□□□□ 0.17
CPNE1Q99829 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE1Q99829 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.08■□□□□ 0.17
CPNE1Q99829 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE1Q99829 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE1Q99829 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.08■□□□□ 0.17
CPNE1Q99829 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.08■□□□□ 0.17
CPNE1Q99829 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE1Q99829 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE1Q99829 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE1Q99829 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CPNE1Q99829 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.08■□□□□ 0.16
CPNE1Q99829 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE1Q99829 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE1Q99829 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.16
CPNE1Q99829 AL109954.1-202ENST00000564051 2148 ntBASIC16.08■□□□□ 0.16
CPNE1Q99829 AP002472.1-201ENST00000577490 586 ntBASIC16.08■□□□□ 0.16
CPNE1Q99829 AC024267.1-201ENST00000582320 895 ntBASIC16.08■□□□□ 0.16
CPNE1Q99829 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE1Q99829 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE1Q99829 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE1Q99829 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE1Q99829 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE1Q99829 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.07■□□□□ 0.16
CPNE1Q99829 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE1Q99829 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CPNE1Q99829 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPNE1Q99829 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE1Q99829 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms