Protein–RNA interactions for Protein: Q99707

MTR, Methionine synthase, humanhuman

Predictions only

Length 1,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTRQ99707 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MTRQ99707 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MTRQ99707 LINC00554-201ENST00000564841 3011 ntBASIC18.1■□□□□ 0.49
MTRQ99707 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.1■□□□□ 0.49
MTRQ99707 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.1■□□□□ 0.49
MTRQ99707 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.1■□□□□ 0.49
MTRQ99707 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.1■□□□□ 0.49
MTRQ99707 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.1■□□□□ 0.49
MTRQ99707 AL353705.2-201ENST00000428243 662 ntBASIC18.1■□□□□ 0.49
MTRQ99707 HMGN1P19-201ENST00000436976 333 ntBASIC18.1■□□□□ 0.49
MTRQ99707 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.1■□□□□ 0.49
MTRQ99707 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.1■□□□□ 0.49
MTRQ99707 DUX4L27-201ENST00000554796 1261 ntBASIC18.1■□□□□ 0.49
MTRQ99707 AC140878.1-201ENST00000565277 250 ntBASIC18.1■□□□□ 0.49
MTRQ99707 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
MTRQ99707 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
MTRQ99707 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MTRQ99707 AC134407.2-201ENST00000625089 1978 ntBASIC18.1■□□□□ 0.49
MTRQ99707 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.09■□□□□ 0.49
MTRQ99707 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MTRQ99707 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 AP003680.1-201ENST00000598970 3660 ntBASIC18.09■□□□□ 0.49
MTRQ99707 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.09■□□□□ 0.49
MTRQ99707 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.09■□□□□ 0.49
MTRQ99707 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.09■□□□□ 0.49
MTRQ99707 AC120057.1-201ENST00000483947 663 ntBASIC18.09■□□□□ 0.49
MTRQ99707 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.09■□□□□ 0.49
MTRQ99707 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.09■□□□□ 0.49
MTRQ99707 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.09■□□□□ 0.49
MTRQ99707 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.09■□□□□ 0.49
MTRQ99707 AC024267.1-201ENST00000582320 895 ntBASIC18.09■□□□□ 0.49
MTRQ99707 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.09■□□□□ 0.49
MTRQ99707 AC007967.4-201ENST00000614700 386 ntBASIC18.09■□□□□ 0.49
MTRQ99707 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
MTRQ99707 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.09■□□□□ 0.49
MTRQ99707 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
MTRQ99707 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MTRQ99707 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
MTRQ99707 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.09■□□□□ 0.49
MTRQ99707 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MTRQ99707 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MTRQ99707 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MTRQ99707 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.08■□□□□ 0.49
MTRQ99707 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.08■□□□□ 0.49
MTRQ99707 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
MTRQ99707 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MTRQ99707 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MTRQ99707 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
MTRQ99707 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
MTRQ99707 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
MTRQ99707 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
MTRQ99707 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.08■□□□□ 0.49
MTRQ99707 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
MTRQ99707 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
MTRQ99707 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MTRQ99707 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MTRQ99707 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
MTRQ99707 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MTRQ99707 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MTRQ99707 MIR770-201ENST00000390219 98 ntBASIC18.08■□□□□ 0.48
MTRQ99707 MIR943-201ENST00000401286 94 ntBASIC18.08■□□□□ 0.48
MTRQ99707 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms