Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 HAUS4P1-201ENST00000406739 1145 ntBASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 AL162430.1-201ENST00000480705 870 ntBASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 AC142086.2-201ENST00000569753 217 ntBASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 MPDU1-223ENST00000582151 728 ntBASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 AC125634.1-201ENST00000438758 1403 ntBASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
CHCHD1Q96BP2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 RPS2P55-201ENST00000397318 883 ntBASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 FAM8A3P-201ENST00000427218 844 ntBASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 NUS1P1-201ENST00000446295 882 ntBASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 AC243591.1-201ENST00000452967 1364 ntBASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 GPR32P1-201ENST00000601788 811 ntBASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 AC027601.5-201ENST00000624065 2482 ntBASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 CICP20-201ENST00000443330 2801 ntBASIC11.73□□□□□ -0.53
CHCHD1Q96BP2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHCHD1Q96BP2 AL122018.1-201ENST00000446607 2310 ntBASIC11.72□□□□□ -0.53
CHCHD1Q96BP2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CHCHD1Q96BP2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms