Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHDHQ8NE62 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHDHQ8NE62 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CHDHQ8NE62 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHDHQ8NE62 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 AL009178.2-201ENST00000597278 2719 ntBASIC15.3■□□□□ 0.04
CHDHQ8NE62 AL009183.1-201ENST00000603760 355 ntBASIC15.3■□□□□ 0.04
CHDHQ8NE62 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.3■□□□□ 0.04
CHDHQ8NE62 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHDHQ8NE62 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 REXO1L8P-201ENST00000604378 1897 ntBASIC15.29■□□□□ 0.04
CHDHQ8NE62 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 AC140658.5-201ENST00000438532 169 ntBASIC15.29■□□□□ 0.04
CHDHQ8NE62 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.29■□□□□ 0.04
CHDHQ8NE62 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHDHQ8NE62 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CHDHQ8NE62 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHDHQ8NE62 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.28■□□□□ 0.04
CHDHQ8NE62 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHDHQ8NE62 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CHDHQ8NE62 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHDHQ8NE62 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CHDHQ8NE62 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHDHQ8NE62 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHDHQ8NE62 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.28■□□□□ 0.04
CHDHQ8NE62 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHDHQ8NE62 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHDHQ8NE62 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms