Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 CU639417.3-201ENST00000624240 1404 ntBASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 MTND6P24-201ENST00000440466 518 ntBASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 HLA-J-202ENST00000469281 1241 ntBASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 AL359881.2-201ENST00000602973 570 ntBASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 AL589739.1-201ENST00000607720 493 ntBASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC155Q8N6L0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 AC009477.1-201ENST00000452936 217 ntBASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC155Q8N6L0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 AC132872.4-202ENST00000622924 2756 ntBASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 AL031731.1-201ENST00000642131 2094 ntBASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 AL008721.1-201ENST00000609964 604 ntBASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 TEX28P1-201ENST00000613479 1221 ntBASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC155Q8N6L0 TEX28P2-201ENST00000617764 1221 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms