Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATPAF2Q8N5M1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 SPDYE7P-202ENST00000420373 878 ntBASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 AP001160.2-201ENST00000596071 487 ntBASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.49■□□□□ 0.23
ATPAF2Q8N5M1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 AL691432.1-201ENST00000596308 1422 ntBASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 AC068587.6-202ENST00000641839 5619 ntBASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 AL136982.4-201ENST00000437689 1740 ntBASIC16.48■□□□□ 0.23
ATPAF2Q8N5M1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATPAF2Q8N5M1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.47■□□□□ 0.23
ATPAF2Q8N5M1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms