Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC015818.8-201ENST00000587907 1519 ntBASIC19.19■□□□□ 0.66
SLX4Q8IY92 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLX4Q8IY92 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLX4Q8IY92 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 AC044849.1-201ENST00000519737 1188 ntBASIC19.18■□□□□ 0.66
SLX4Q8IY92 AP003171.2-201ENST00000528208 925 ntBASIC19.18■□□□□ 0.66
SLX4Q8IY92 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 SPCS2P2-201ENST00000603270 608 ntBASIC19.18■□□□□ 0.66
SLX4Q8IY92 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 AL023775.1-201ENST00000454907 1746 ntBASIC19.18■□□□□ 0.66
SLX4Q8IY92 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 AC104457.1-201ENST00000401024 814 ntBASIC19.18■□□□□ 0.66
SLX4Q8IY92 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 AC005730.2-201ENST00000564549 1184 ntBASIC19.18■□□□□ 0.66
SLX4Q8IY92 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.18■□□□□ 0.66
SLX4Q8IY92 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLX4Q8IY92 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 AC091812.3-201ENST00000621362 345 ntBASIC19.17■□□□□ 0.66
SLX4Q8IY92 RNF165-205ENST00000588679 2904 ntBASIC19.17■□□□□ 0.66
SLX4Q8IY92 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.17■□□□□ 0.66
SLX4Q8IY92 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLX4Q8IY92 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLX4Q8IY92 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLX4Q8IY92 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 NKAIN1P1-201ENST00000435754 582 ntBASIC19.16■□□□□ 0.66
SLX4Q8IY92 RNA5SP486-201ENST00000515961 83 ntBASIC19.16■□□□□ 0.66
SLX4Q8IY92 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLX4Q8IY92 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLX4Q8IY92 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLX4Q8IY92 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLX4Q8IY92 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLX4Q8IY92 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLX4Q8IY92 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms