Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
REEP3Q6NUK4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.03■□□□□ -0
REEP3Q6NUK4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
REEP3Q6NUK4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
REEP3Q6NUK4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
REEP3Q6NUK4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
REEP3Q6NUK4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.03■□□□□ -0
REEP3Q6NUK4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.03■□□□□ -0
REEP3Q6NUK4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
REEP3Q6NUK4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
REEP3Q6NUK4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.03■□□□□ -0
REEP3Q6NUK4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
REEP3Q6NUK4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
REEP3Q6NUK4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
REEP3Q6NUK4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
REEP3Q6NUK4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
REEP3Q6NUK4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
REEP3Q6NUK4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.02■□□□□ -0
REEP3Q6NUK4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.02■□□□□ -0
REEP3Q6NUK4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.02■□□□□ -0
REEP3Q6NUK4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
REEP3Q6NUK4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
REEP3Q6NUK4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.02■□□□□ -0
REEP3Q6NUK4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
REEP3Q6NUK4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
REEP3Q6NUK4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.02■□□□□ -0
REEP3Q6NUK4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.02■□□□□ -0
REEP3Q6NUK4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.02■□□□□ -0
REEP3Q6NUK4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.02■□□□□ -0
REEP3Q6NUK4 KRT126P-201ENST00000549467 1181 ntBASIC15.02■□□□□ -0
REEP3Q6NUK4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
REEP3Q6NUK4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.02■□□□□ -0
REEP3Q6NUK4 AC034105.1-201ENST00000563488 319 ntBASIC15.02■□□□□ -0
REEP3Q6NUK4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.02■□□□□ -0
REEP3Q6NUK4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.02■□□□□ -0
REEP3Q6NUK4 AC068137.2-201ENST00000605408 478 ntBASIC15.02■□□□□ -0
REEP3Q6NUK4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.02■□□□□ -0
REEP3Q6NUK4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 AC134407.2-201ENST00000625089 1978 ntBASIC15.02□□□□□ -0.01
REEP3Q6NUK4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.02□□□□□ -0.01
REEP3Q6NUK4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AC104109.2-201ENST00000602919 1418 ntBASIC15.01□□□□□ -0.01
REEP3Q6NUK4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AC002056.1-201ENST00000395613 760 ntBASIC15.01□□□□□ -0.01
REEP3Q6NUK4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AC087481.3-201ENST00000602886 1894 ntBASIC15.01□□□□□ -0.01
REEP3Q6NUK4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.01□□□□□ -0.01
REEP3Q6NUK4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
REEP3Q6NUK4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15□□□□□ -0.01
REEP3Q6NUK4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms