Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRNP1Q6NT89 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 CETN4P-206ENST00000642099 2168 ntBASIC16.65■□□□□ 0.26
TRNP1Q6NT89 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.65■□□□□ 0.26
TRNP1Q6NT89 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 TREML5P-201ENST00000421694 576 ntBASIC16.65■□□□□ 0.26
TRNP1Q6NT89 AC107890.1-201ENST00000422478 521 ntBASIC16.65■□□□□ 0.26
TRNP1Q6NT89 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 HLA-V-204ENST00000476601 1289 ntBASIC16.65■□□□□ 0.26
TRNP1Q6NT89 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 AC140878.1-201ENST00000565277 250 ntBASIC16.65■□□□□ 0.26
TRNP1Q6NT89 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 AL390955.2-201ENST00000603032 514 ntBASIC16.65■□□□□ 0.26
TRNP1Q6NT89 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRNP1Q6NT89 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRNP1Q6NT89 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRNP1Q6NT89 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.64■□□□□ 0.26
TRNP1Q6NT89 FO538757.1-201ENST00000623083 1397 ntBASIC16.64■□□□□ 0.26
TRNP1Q6NT89 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.64■□□□□ 0.26
TRNP1Q6NT89 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
TRNP1Q6NT89 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRNP1Q6NT89 AL607033.1-201ENST00000623900 1599 ntBASIC16.64■□□□□ 0.25
TRNP1Q6NT89 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AC074338.1-201ENST00000416825 156 ntBASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AC097493.3-201ENST00000509725 367 ntBASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AC073592.8-201ENST00000624126 511 ntBASIC16.64■□□□□ 0.25
TRNP1Q6NT89 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.64■□□□□ 0.25
TRNP1Q6NT89 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms