Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 AC106028.4-201ENST00000614509 607 ntBASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC39BQ5VTQ0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 AC107890.1-201ENST00000422478 521 ntBASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 AC140878.1-201ENST00000565277 250 ntBASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC39BQ5VTQ0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 AC061975.2-201ENST00000581722 295 ntBASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 AC026979.3-201ENST00000607315 403 ntBASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 AC003101.2-201ENST00000612557 442 ntBASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.77■□□□□ 0.28
TTC39BQ5VTQ0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC39BQ5VTQ0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms