Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KCNA1Q09470 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNA1Q09470 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.65■□□□□ 0.42
KCNA1Q09470 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 TUBB3P1-201ENST00000405796 1332 ntBASIC17.65■□□□□ 0.42
KCNA1Q09470 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.65■□□□□ 0.42
KCNA1Q09470 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNA1Q09470 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNA1Q09470 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
KCNA1Q09470 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNA1Q09470 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.64■□□□□ 0.42
KCNA1Q09470 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA1Q09470 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA1Q09470 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA1Q09470 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
KCNA1Q09470 MTND6P24-201ENST00000440466 518 ntBASIC17.64■□□□□ 0.41
KCNA1Q09470 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA1Q09470 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA1Q09470 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA1Q09470 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA1Q09470 AC243562.2-201ENST00000561247 970 ntBASIC17.64■□□□□ 0.41
KCNA1Q09470 AC025678.2-201ENST00000562061 970 ntBASIC17.64■□□□□ 0.41
KCNA1Q09470 AC051619.7-201ENST00000568314 623 ntBASIC17.64■□□□□ 0.41
KCNA1Q09470 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA1Q09470 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA1Q09470 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
KCNA1Q09470 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KCNA1Q09470 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.64■□□□□ 0.41
KCNA1Q09470 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 AC011477.6-201ENST00000604980 1927 ntBASIC17.64■□□□□ 0.41
KCNA1Q09470 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KCNA1Q09470 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA1Q09470 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
KCNA1Q09470 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNA1Q09470 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KCNA1Q09470 REXO1L1P-202ENST00000608646 1974 ntBASIC17.63■□□□□ 0.41
KCNA1Q09470 AC004987.2-201ENST00000395959 1148 ntBASIC17.63■□□□□ 0.41
KCNA1Q09470 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.63■□□□□ 0.41
KCNA1Q09470 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.63■□□□□ 0.41
KCNA1Q09470 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNA1Q09470 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.63■□□□□ 0.41
KCNA1Q09470 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.63■□□□□ 0.41
KCNA1Q09470 AC015911.4-201ENST00000588022 1070 ntBASIC17.63■□□□□ 0.41
KCNA1Q09470 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
KCNA1Q09470 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
KCNA1Q09470 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA1Q09470 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNA1Q09470 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNA1Q09470 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KCNA1Q09470 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNA1Q09470 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA1Q09470 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms