Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 AL031284.1-201ENST00000419297 478 ntBASIC15.18■□□□□ 0.02
TUBA4AP68366 OR7E14P-202ENST00000530490 1290 ntBASIC15.18■□□□□ 0.02
TUBA4AP68366 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBA4AP68366 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.18■□□□□ 0.02
TUBA4AP68366 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBA4AP68366 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TUBA4AP68366 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 AC087481.3-201ENST00000602886 1894 ntBASIC15.18■□□□□ 0.02
TUBA4AP68366 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBA4AP68366 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBA4AP68366 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TUBA4AP68366 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.17■□□□□ 0.02
TUBA4AP68366 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 AC005912.2-201ENST00000619492 2400 ntBASIC15.17■□□□□ 0.02
TUBA4AP68366 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TUBA4AP68366 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.17■□□□□ 0.02
TUBA4AP68366 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.17■□□□□ 0.02
TUBA4AP68366 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 MIR7706-201ENST00000613747 67 ntBASIC15.17■□□□□ 0.02
TUBA4AP68366 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.17■□□□□ 0.02
TUBA4AP68366 FAM215A-202ENST00000632077 792 ntBASIC15.17■□□□□ 0.02
TUBA4AP68366 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.17■□□□□ 0.02
TUBA4AP68366 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TUBA4AP68366 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.17■□□□□ 0.02
TUBA4AP68366 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TUBA4AP68366 KRT8P49-201ENST00000604166 1432 ntBASIC15.17■□□□□ 0.02
TUBA4AP68366 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TUBA4AP68366 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBA4AP68366 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBA4AP68366 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBA4AP68366 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TUBA4AP68366 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBA4AP68366 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms