Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNB3P54284 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.91■□□□□ 0.62
CACNB3P54284 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.91■□□□□ 0.62
CACNB3P54284 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CACNB3P54284 REXO1L1P-202ENST00000608646 1974 ntBASIC18.91■□□□□ 0.62
CACNB3P54284 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CACNB3P54284 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNB3P54284 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNB3P54284 MSTO2P-201ENST00000314835 1709 ntBASIC18.91■□□□□ 0.62
CACNB3P54284 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.91■□□□□ 0.62
CACNB3P54284 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNB3P54284 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.91■□□□□ 0.62
CACNB3P54284 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.91■□□□□ 0.62
CACNB3P54284 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CACNB3P54284 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.91■□□□□ 0.62
CACNB3P54284 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CACNB3P54284 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CACNB3P54284 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 BOLA2P3-201ENST00000404566 256 ntBASIC18.9■□□□□ 0.62
CACNB3P54284 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CACNB3P54284 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CACNB3P54284 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.9■□□□□ 0.62
CACNB3P54284 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 AC124283.3-201ENST00000570869 594 ntBASIC18.9■□□□□ 0.62
CACNB3P54284 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.9■□□□□ 0.62
CACNB3P54284 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CACNB3P54284 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.9■□□□□ 0.62
CACNB3P54284 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CACNB3P54284 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CACNB3P54284 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CACNB3P54284 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNB3P54284 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.89■□□□□ 0.61
CACNB3P54284 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNB3P54284 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNB3P54284 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 PHKG1P2-201ENST00000457537 863 ntBASIC18.89■□□□□ 0.61
CACNB3P54284 VDAC1P7-201ENST00000462417 847 ntBASIC18.89■□□□□ 0.61
CACNB3P54284 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.89■□□□□ 0.61
CACNB3P54284 HNRNPUP1-201ENST00000554987 333 ntBASIC18.89■□□□□ 0.61
CACNB3P54284 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CACNB3P54284 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNB3P54284 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNB3P54284 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.89■□□□□ 0.61
CACNB3P54284 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNB3P54284 INTS4P2-202ENST00000614726 2019 ntBASIC18.89■□□□□ 0.61
CACNB3P54284 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNB3P54284 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.89■□□□□ 0.61
CACNB3P54284 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CACNB3P54284 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CACNB3P54284 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.88■□□□□ 0.61
CACNB3P54284 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CACNB3P54284 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.88■□□□□ 0.61
CACNB3P54284 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.88■□□□□ 0.61
CACNB3P54284 TOMM22P5-201ENST00000416399 439 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms