Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.24■□□□□ 0.19
LIMK2P53671 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 AC005237.2-201ENST00000434368 219 ntBASIC16.24■□□□□ 0.19
LIMK2P53671 AL592309.1-201ENST00000443127 649 ntBASIC16.24■□□□□ 0.19
LIMK2P53671 AC245100.5-201ENST00000452108 331 ntBASIC16.24■□□□□ 0.19
LIMK2P53671 KRT18P34-201ENST00000488218 1270 ntBASIC16.24■□□□□ 0.19
LIMK2P53671 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LIMK2P53671 RARRES2P8-201ENST00000566335 367 ntBASIC16.24■□□□□ 0.19
LIMK2P53671 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LIMK2P53671 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.24■□□□□ 0.19
LIMK2P53671 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
LIMK2P53671 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 AC073347.1-201ENST00000421633 2643 ntBASIC16.24■□□□□ 0.19
LIMK2P53671 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.24■□□□□ 0.19
LIMK2P53671 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LIMK2P53671 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.24■□□□□ 0.19
LIMK2P53671 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIMK2P53671 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.23■□□□□ 0.19
LIMK2P53671 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.23■□□□□ 0.19
LIMK2P53671 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.23■□□□□ 0.19
LIMK2P53671 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.23■□□□□ 0.19
LIMK2P53671 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.23■□□□□ 0.19
LIMK2P53671 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LIMK2P53671 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.23■□□□□ 0.19
LIMK2P53671 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LIMK2P53671 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.23■□□□□ 0.19
LIMK2P53671 AC079140.1-201ENST00000508039 487 ntBASIC16.23■□□□□ 0.19
LIMK2P53671 AC243562.1-201ENST00000560672 389 ntBASIC16.23■□□□□ 0.19
LIMK2P53671 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.23■□□□□ 0.19
LIMK2P53671 AL135744.1-201ENST00000565098 629 ntBASIC16.23■□□□□ 0.19
LIMK2P53671 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
LIMK2P53671 AC011467.4-201ENST00000594891 528 ntBASIC16.23■□□□□ 0.19
LIMK2P53671 AC093512.1-201ENST00000617969 520 ntBASIC16.23■□□□□ 0.19
LIMK2P53671 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.23■□□□□ 0.19
LIMK2P53671 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LIMK2P53671 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.23■□□□□ 0.19
LIMK2P53671 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.23■□□□□ 0.19
LIMK2P53671 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIMK2P53671 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
LIMK2P53671 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.22■□□□□ 0.19
LIMK2P53671 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LIMK2P53671 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.22■□□□□ 0.19
LIMK2P53671 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.22■□□□□ 0.19
LIMK2P53671 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 AL365330.1-201ENST00000607459 531 ntBASIC16.22■□□□□ 0.19
LIMK2P53671 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.22■□□□□ 0.19
LIMK2P53671 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LIMK2P53671 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LIMK2P53671 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms