Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCN1P35523 AC091304.2-201ENST00000564639 760 ntBASIC18.38■□□□□ 0.53
CLCN1P35523 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCN1P35523 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.38■□□□□ 0.53
CLCN1P35523 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCN1P35523 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLCN1P35523 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCN1P35523 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLCN1P35523 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLCN1P35523 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 AC087481.3-201ENST00000602886 1894 ntBASIC18.37■□□□□ 0.53
CLCN1P35523 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCN1P35523 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 AKR1C7P-201ENST00000305623 895 ntBASIC18.37■□□□□ 0.53
CLCN1P35523 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.37■□□□□ 0.53
CLCN1P35523 PRELID1P1-202ENST00000567272 903 ntBASIC18.37■□□□□ 0.53
CLCN1P35523 AC064862.7-201ENST00000604520 867 ntBASIC18.37■□□□□ 0.53
CLCN1P35523 AL355877.3-201ENST00000622820 899 ntBASIC18.37■□□□□ 0.53
CLCN1P35523 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLCN1P35523 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 CICP8-201ENST00000455800 2813 ntBASIC18.37■□□□□ 0.53
CLCN1P35523 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCN1P35523 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCN1P35523 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCN1P35523 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLCN1P35523 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLCN1P35523 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLCN1P35523 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCN1P35523 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCN1P35523 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CLCN1P35523 CLEC4GP1-201ENST00000596555 870 ntBASIC18.36■□□□□ 0.53
CLCN1P35523 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCN1P35523 REXO1L6P-202ENST00000619970 1078 ntBASIC18.36■□□□□ 0.53
CLCN1P35523 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCN1P35523 AL356585.2-201ENST00000625078 2396 ntBASIC18.36■□□□□ 0.53
CLCN1P35523 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLCN1P35523 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLCN1P35523 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.36■□□□□ 0.53
CLCN1P35523 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCN1P35523 AC027601.5-201ENST00000624065 2482 ntBASIC18.35■□□□□ 0.53
CLCN1P35523 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLCN1P35523 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLCN1P35523 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 MBLAC2-202ENST00000514906 1936 ntBASIC18.35■□□□□ 0.53
CLCN1P35523 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 REXO1L8P-201ENST00000604378 1897 ntBASIC18.35■□□□□ 0.53
CLCN1P35523 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLCN1P35523 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCN1P35523 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CLCN1P35523 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCN1P35523 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.35■□□□□ 0.53
CLCN1P35523 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms