Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXC12P31275 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXC12P31275 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HOXC12P31275 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HOXC12P31275 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
HOXC12P31275 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HOXC12P31275 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXC12P31275 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXC12P31275 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXC12P31275 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXC12P31275 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXC12P31275 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXC12P31275 AC003101.2-201ENST00000612557 442 ntBASIC14.32□□□□□ -0.12
HOXC12P31275 AL662799.1-202ENST00000614205 422 ntBASIC14.32□□□□□ -0.12
HOXC12P31275 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.32□□□□□ -0.12
HOXC12P31275 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 AC005622.1-201ENST00000636801 1703 ntBASIC14.32□□□□□ -0.12
HOXC12P31275 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HOXC12P31275 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXC12P31275 OR2I1P-209ENST00000641730 5365 ntBASIC14.32□□□□□ -0.12
HOXC12P31275 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXC12P31275 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HOXC12P31275 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXC12P31275 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.31□□□□□ -0.12
HOXC12P31275 PIN1P1-201ENST00000412108 996 ntBASIC14.31□□□□□ -0.12
HOXC12P31275 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXC12P31275 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXC12P31275 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.31□□□□□ -0.12
HOXC12P31275 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.31□□□□□ -0.12
HOXC12P31275 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 AL365330.1-201ENST00000607459 531 ntBASIC14.31□□□□□ -0.12
HOXC12P31275 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXC12P31275 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
HOXC12P31275 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXC12P31275 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 AC079328.2-201ENST00000561241 3354 ntBASIC14.31□□□□□ -0.12
HOXC12P31275 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXC12P31275 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXC12P31275 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXC12P31275 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXC12P31275 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms