Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.57□□□□□ -0.08
GDF1P27539 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GDF1P27539 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
GDF1P27539 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
GDF1P27539 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 AC004987.2-201ENST00000395959 1148 ntBASIC14.57□□□□□ -0.08
GDF1P27539 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.57□□□□□ -0.08
GDF1P27539 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.57□□□□□ -0.08
GDF1P27539 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.57□□□□□ -0.08
GDF1P27539 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.57□□□□□ -0.08
GDF1P27539 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.57□□□□□ -0.08
GDF1P27539 AC009407.1-201ENST00000568958 598 ntBASIC14.57□□□□□ -0.08
GDF1P27539 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.57□□□□□ -0.08
GDF1P27539 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.57□□□□□ -0.08
GDF1P27539 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GDF1P27539 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.57□□□□□ -0.08
GDF1P27539 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
GDF1P27539 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.57□□□□□ -0.08
GDF1P27539 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
GDF1P27539 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
GDF1P27539 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GDF1P27539 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GDF1P27539 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.56□□□□□ -0.08
GDF1P27539 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GDF1P27539 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
GDF1P27539 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GDF1P27539 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.56□□□□□ -0.08
GDF1P27539 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GDF1P27539 AL035633.1-201ENST00000406139 838 ntBASIC14.56□□□□□ -0.08
GDF1P27539 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.56□□□□□ -0.08
GDF1P27539 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.56□□□□□ -0.08
GDF1P27539 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.56□□□□□ -0.08
GDF1P27539 AC044860.1-202ENST00000559481 777 ntBASIC14.56□□□□□ -0.08
GDF1P27539 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.56□□□□□ -0.08
GDF1P27539 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.56□□□□□ -0.08
GDF1P27539 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.56□□□□□ -0.08
GDF1P27539 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.56□□□□□ -0.08
GDF1P27539 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
GDF1P27539 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GDF1P27539 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
GDF1P27539 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.55□□□□□ -0.08
GDF1P27539 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
GDF1P27539 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
GDF1P27539 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms