Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SDF2-208ENST00000589788 1342 ntTSL 210.07□□□□□ -0.85e-7■■□□□ 12.2
RPS3P23396 SDF2-209ENST00000591903 735 ntTSL 39.86□□□□□ -0.835e-7■■□□□ 12.2
RPS3P23396 SDF2-203ENST00000585749 823 ntTSL 38.95□□□□□ -0.985e-7■■□□□ 12.2
RPS3P23396 SDF2-207ENST00000588472 681 ntTSL 28.55□□□□□ -1.045e-7■■□□□ 12.2
RPS3P23396 SDF2-204ENST00000587338 583 ntTSL 37.96□□□□□ -1.145e-7■■□□□ 12.2
RPS3P23396 ADD1-209ENST00000503169 2394 ntTSL 27.77□□□□□ -1.175e-7■■□□□ 12.2
RPS3P23396 SDF2-210ENST00000592250 1025 ntTSL 27.76□□□□□ -1.175e-7■■□□□ 12.2
RPS3P23396 GLUD1-204ENST00000487058 409 ntTSL 37.19□□□□□ -1.265e-7■■□□□ 12.2
RPS3P23396 HMCES-207ENST00000510314 599 ntTSL 57.12□□□□□ -1.275e-7■■□□□ 12.2
RPS3P23396 GMDS-209ENST00000531690 515 ntTSL 56.41□□□□□ -1.385e-7■■□□□ 12.2
RPS3P23396 HSP90AA1-206ENST00000556554 552 ntTSL 26.25□□□□□ -1.415e-7■■□□□ 12.2
RPS3P23396 SDF2-205ENST00000587629 775 ntTSL 36.09□□□□□ -1.435e-7■■□□□ 12.2
RPS3P23396 SDF2-206ENST00000587788 444 ntTSL 35.65□□□□□ -1.55e-7■■□□□ 12.2
RPS3P23396 HSP90AA1-203ENST00000553585 581 ntTSL 35.37□□□□□ -1.555e-7■■□□□ 12.2
RPS3P23396 ACSL4-209ENST00000505075 390 ntTSL 33.88□□□□□ -1.795e-7■■□□□ 12.2
RPS3P23396 RNA5SP48-201ENST00000363969 126 ntBASIC-0.25□□□□□ -2.455e-7■■□□□ 12.2
RPS3P23396 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.31■■□□□ 1.326e-8■■□□□ 12.2
RPS3P23396 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.9■■□□□ 1.16e-8■■□□□ 12.2
RPS3P23396 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.826e-8■■□□□ 12.2
RPS3P23396 PYCR1-212ENST00000583564 377 ntTSL 319.63■□□□□ 0.731e-7■■□□□ 12.2
RPS3P23396 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.24■□□□□ 0.676e-8■■□□□ 12.2
RPS3P23396 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.78■□□□□ 0.446e-8■■□□□ 12.2
RPS3P23396 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.246e-8■■□□□ 12.2
RPS3P23396 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.04■□□□□ 0.166e-8■■□□□ 12.2
RPS3P23396 PYCR1-210ENST00000581271 528 ntTSL 415.96■□□□□ 0.151e-7■■□□□ 12.2
RPS3P23396 PYCR1-213ENST00000584848 949 ntTSL 514.43□□□□□ -0.16e-8■■□□□ 12.2
RPS3P23396 PYCR1-208ENST00000579366 681 ntTSL 310.67□□□□□ -0.71e-7■■□□□ 12.2
RPS3P23396 DCXR-212ENST00000579842 715 ntTSL 319.74■□□□□ 0.751e-10■■□□□ 12.2
RPS3P23396 DCXR-216ENST00000582074 631 ntTSL 311.1□□□□□ -0.631e-10■■□□□ 12.2
RPS3P23396 DCXR-203ENST00000577532 573 ntTSL 37.34□□□□□ -1.231e-10■■□□□ 12.2
RPS3P23396 ABCB6-206ENST00000452545 544 ntTSL 415.71■□□□□ 0.111e-6■■□□□ 12.2
RPS3P23396 AAAS-215ENST00000549983 860 ntTSL 315.79■□□□□ 0.123e-6■■□□□ 12.2
RPS3P23396 AAAS-206ENST00000547238 1154 ntTSL 212.1□□□□□ -0.473e-6■■□□□ 12.2
RPS3P23396 AAAS-208ENST00000547757 949 ntTSL 29.4□□□□□ -0.93e-6■■□□□ 12.2
RPS3P23396 AAAS-209ENST00000547761 827 ntTSL 59.4□□□□□ -0.93e-6■■□□□ 12.2
RPS3P23396 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-10■■□□□ 12.2
RPS3P23396 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.092e-8■■□□□ 12.2
RPS3P23396 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.88■■□□□ 1.091e-11■■□□□ 12.2
RPS3P23396 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.831e-11■■□□□ 12.2
RPS3P23396 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.651e-11■■□□□ 12.2
RPS3P23396 RNASEK-C17orf49-202ENST00000547863 1662 ntTSL 223.52■■□□□ 1.365e-13■■□□□ 12.2
RPS3P23396 RNASEK-205ENST00000552176 1485 ntTSL 223.37■■□□□ 1.335e-13■■□□□ 12.2
RPS3P23396 RNASEK-C17orf49-203ENST00000549775 1856 ntTSL 521.03■□□□□ 0.965e-13■■□□□ 12.2
RPS3P23396 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.655e-13■■□□□ 12.2
RPS3P23396 RNASEK-209ENST00000575822 613 ntTSL 318.77■□□□□ 0.65e-13■■□□□ 12.2
RPS3P23396 RNASEK-201ENST00000546395 952 ntTSL 1 (best)17.01■□□□□ 0.315e-13■■□□□ 12.2
RPS3P23396 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.01■□□□□ 0.315e-13■■□□□ 12.2
RPS3P23396 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.66■□□□□ 0.15e-13■■□□□ 12.2
RPS3P23396 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.275e-13■■□□□ 12.2
RPS3P23396 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.36□□□□□ -0.275e-13■■□□□ 12.2
RPS3P23396 RNASEK-208ENST00000570898 425 ntTSL 3 BASIC10.76□□□□□ -0.695e-13■■□□□ 12.2
RPS3P23396 PON2-213ENST00000491069 566 ntTSL 216.25■□□□□ 0.199e-7■■□□□ 12.2
RPS3P23396 PON2-210ENST00000478801 555 ntTSL 47.94□□□□□ -1.149e-7■■□□□ 12.2
RPS3P23396 BCAM-204ENST00000588714 723 ntTSL 213.98□□□□□ -0.173e-16■■□□□ 12.2
RPS3P23396 GLS-215ENST00000496170 673 ntTSL 323.08■■□□□ 1.298e-15■■□□□ 12.2
RPS3P23396 FDPS-205ENST00000465559 677 ntTSL 315.23■□□□□ 0.031e-8■■□□□ 12.2
RPS3P23396 CDC45-208ENST00000471470 857 ntTSL 512.53□□□□□ -0.43e-6■■□□□ 12.2
RPS3P23396 EEF1A1-207ENST00000490569 1802 ntTSL 57.28□□□□□ -1.244e-17■■□□□ 12.2
RPS3P23396 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.761e-7■■□□□ 12.2
RPS3P23396 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.671e-7■■□□□ 12.2
RPS3P23396 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.35■■□□□ 1.651e-7■■□□□ 12.2
RPS3P23396 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-220ENST00000519767 970 ntTSL 1 (best)24.39■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.491e-7■■□□□ 12.2
RPS3P23396 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.441e-7■■□□□ 12.2
RPS3P23396 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.33■□□□□ 0.851e-7■■□□□ 12.2
RPS3P23396 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.2■□□□□ 0.51e-7■■□□□ 12.2
RPS3P23396 DCXR-217ENST00000582613 617 ntTSL 224.68■■□□□ 1.541e-10■■□□□ 12.2
RPS3P23396 DCXR-219ENST00000584318 284 ntTSL 514.55□□□□□ -0.081e-10■■□□□ 12.2
RPS3P23396 HSPA9-206ENST00000506477 664 ntTSL 216.45■□□□□ 0.225e-13■■□□□ 12.2
RPS3P23396 AARS-205ENST00000567490 533 ntTSL 28.31□□□□□ -1.082e-6■■□□□ 12.2
RPS3P23396 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.332e-6■■□□□ 12.2
RPS3P23396 NCLN-206ENST00000591062 460 ntTSL 514.18□□□□□ -0.148e-8■■□□□ 12.2
RPS3P23396 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.54□□□□□ -0.241e-7■■□□□ 12.2
RPS3P23396 HINT1-204ENST00000506908 681 ntTSL 2 BASIC13.26□□□□□ -0.291e-7■■□□□ 12.2
RPS3P23396 HINT1-208ENST00000513012 583 ntTSL 4 BASIC10.84□□□□□ -0.671e-7■■□□□ 12.2
RPS3P23396 HINT1-202ENST00000504202 619 ntTSL 53.41□□□□□ -1.861e-7■■□□□ 12.2
RPS3P23396 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.917e-7■■□□□ 12.2
RPS3P23396 COPS9-202ENST00000403160 609 ntTSL 215.89■□□□□ 0.134e-6■■□□□ 12.2
RPS3P23396 DTYMK-202ENST00000400770 1089 ntTSL 1 (best)15.29■□□□□ 0.047e-7■■□□□ 12.2
RPS3P23396 DTYMK-205ENST00000445261 518 ntTSL 513.9□□□□□ -0.187e-7■■□□□ 12.2
RPS3P23396 DTYMK-203ENST00000420144 575 ntTSL 511.49□□□□□ -0.577e-7■■□□□ 12.2
RPS3P23396 DTYMK-204ENST00000432348 926 ntTSL 56.02□□□□□ -1.457e-7■■□□□ 12.2
RPS3P23396 KIF2C-205ENST00000455186 908 ntTSL 59.47□□□□□ -0.897e-7■■□□□ 12.2
RPS3P23396 HNRNPF-206ENST00000498176 715 ntTSL 1 (best)21.79■■□□□ 1.084e-12■■□□□ 12.2
RPS3P23396 PPP2CA-201ENST00000231504 564 ntTSL 425.8■■□□□ 1.721e-6■■□□□ 12.2
RPS3P23396 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.08■□□□□ 0.81e-6■■□□□ 12.2
RPS3P23396 FOXRED1-215ENST00000533395 704 ntTSL 518.06■□□□□ 0.481e-6■■□□□ 12.2
RPS3P23396 FOXRED1-203ENST00000525083 1228 ntTSL 217.04■□□□□ 0.321e-6■■□□□ 12.2
RPS3P23396 MIIP-207ENST00000498685 1392 ntTSL 216.86■□□□□ 0.291e-6■■□□□ 12.2
RPS3P23396 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.31■□□□□ 0.29e-9■■□□□ 12.2
RPS3P23396 GCN1-209ENST00000551920 558 ntTSL 316.01■□□□□ 0.151e-6■■□□□ 12.2
RPS3P23396 FOXRED1-207ENST00000527004 1760 ntTSL 515.76■□□□□ 0.111e-6■■□□□ 12.2
Retrieved 100 of 24,271 protein–RNA pairs in 163.3 ms