Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSN3P07498 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSN3P07498 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSN3P07498 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSN3P07498 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSN3P07498 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.75□□□□□ -0.37
CSN3P07498 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.75□□□□□ -0.37
CSN3P07498 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.75□□□□□ -0.37
CSN3P07498 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 AC002056.1-201ENST00000395613 760 ntBASIC12.75□□□□□ -0.37
CSN3P07498 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.75□□□□□ -0.37
CSN3P07498 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.75□□□□□ -0.37
CSN3P07498 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.75□□□□□ -0.37
CSN3P07498 YBX1P5-201ENST00000509441 847 ntBASIC12.75□□□□□ -0.37
CSN3P07498 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 AC112191.1-201ENST00000523689 701 ntBASIC12.75□□□□□ -0.37
CSN3P07498 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.75□□□□□ -0.37
CSN3P07498 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
CSN3P07498 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.75□□□□□ -0.37
CSN3P07498 CYP2A7P1-201ENST00000595391 815 ntBASIC12.75□□□□□ -0.37
CSN3P07498 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CSN3P07498 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
CSN3P07498 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CSN3P07498 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CSN3P07498 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CSN3P07498 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.74□□□□□ -0.37
CSN3P07498 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CSN3P07498 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CSN3P07498 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.74□□□□□ -0.37
CSN3P07498 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.74□□□□□ -0.37
CSN3P07498 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.74□□□□□ -0.37
CSN3P07498 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.74□□□□□ -0.37
CSN3P07498 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.74□□□□□ -0.37
CSN3P07498 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CSN3P07498 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.74□□□□□ -0.37
CSN3P07498 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.74□□□□□ -0.37
CSN3P07498 MIR4469-201ENST00000583919 79 ntBASIC12.74□□□□□ -0.37
CSN3P07498 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.74□□□□□ -0.37
CSN3P07498 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.74□□□□□ -0.37
CSN3P07498 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
CSN3P07498 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.74□□□□□ -0.37
CSN3P07498 AC092902.6-201ENST00000641783 218 ntBASIC12.74□□□□□ -0.37
CSN3P07498 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CSN3P07498 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms