Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.11■□□□□ 0.01
PDGFAP04085 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFAP04085 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDGFAP04085 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PDGFAP04085 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 AC098614.1-201ENST00000368528 745 ntBASIC15.11■□□□□ 0.01
PDGFAP04085 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
PDGFAP04085 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.11■□□□□ 0.01
PDGFAP04085 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.11■□□□□ 0.01
PDGFAP04085 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFAP04085 AL079307.3-201ENST00000556114 283 ntBASIC15.11■□□□□ 0.01
PDGFAP04085 CHCHD2P3-201ENST00000603038 451 ntBASIC15.11■□□□□ 0.01
PDGFAP04085 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDGFAP04085 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFAP04085 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.11■□□□□ 0.01
PDGFAP04085 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PDGFAP04085 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDGFAP04085 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 AC022188.1-201ENST00000620960 1664 ntBASIC15.1■□□□□ 0.01
PDGFAP04085 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.1■□□□□ 0.01
PDGFAP04085 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 SPDYE18-201ENST00000510091 1050 ntBASIC15.1■□□□□ 0.01
PDGFAP04085 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 NIFKP4-201ENST00000567275 1192 ntBASIC15.1■□□□□ 0.01
PDGFAP04085 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.1■□□□□ 0.01
PDGFAP04085 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.1■□□□□ 0.01
PDGFAP04085 AC008494.3-201ENST00000606615 944 ntBASIC15.1■□□□□ 0.01
PDGFAP04085 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
PDGFAP04085 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.1■□□□□ 0.01
PDGFAP04085 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDGFAP04085 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PDGFAP04085 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PDGFAP04085 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
PDGFAP04085 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms