Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 HYMAI-201ENST00000635591 3347 ntBASIC15.65■□□□□ 0.1
KRT6AP02538 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
KRT6AP02538 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
KRT6AP02538 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 AL590627.1-203ENST00000421194 1026 ntBASIC15.65■□□□□ 0.1
KRT6AP02538 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.65■□□□□ 0.1
KRT6AP02538 AL591424.1-201ENST00000442569 1213 ntBASIC15.65■□□□□ 0.1
KRT6AP02538 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.65■□□□□ 0.1
KRT6AP02538 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.65■□□□□ 0.1
KRT6AP02538 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.65■□□□□ 0.1
KRT6AP02538 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
KRT6AP02538 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.65■□□□□ 0.1
KRT6AP02538 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 AC126755.1-201ENST00000525846 6405 ntBASIC15.65■□□□□ 0.1
KRT6AP02538 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
KRT6AP02538 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
KRT6AP02538 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
KRT6AP02538 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
KRT6AP02538 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.64■□□□□ 0.09
KRT6AP02538 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.64■□□□□ 0.09
KRT6AP02538 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.64■□□□□ 0.09
KRT6AP02538 AP002472.1-201ENST00000577490 586 ntBASIC15.64■□□□□ 0.09
KRT6AP02538 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.64■□□□□ 0.09
KRT6AP02538 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.64■□□□□ 0.09
KRT6AP02538 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.64■□□□□ 0.09
KRT6AP02538 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
KRT6AP02538 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
KRT6AP02538 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
KRT6AP02538 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
KRT6AP02538 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.63■□□□□ 0.09
KRT6AP02538 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 AC011477.6-201ENST00000604980 1927 ntBASIC15.63■□□□□ 0.09
KRT6AP02538 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
KRT6AP02538 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.63■□□□□ 0.09
KRT6AP02538 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.63■□□□□ 0.09
KRT6AP02538 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms