Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.35□□□□□ -0.11
CNOT4O95628 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 AGGF1P2-201ENST00000426656 2106 ntBASIC14.35□□□□□ -0.11
CNOT4O95628 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.35□□□□□ -0.11
CNOT4O95628 MIR943-201ENST00000401286 94 ntBASIC14.35□□□□□ -0.11
CNOT4O95628 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 AC069120.2-201ENST00000524091 540 ntBASIC14.35□□□□□ -0.11
CNOT4O95628 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.35□□□□□ -0.11
CNOT4O95628 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.35□□□□□ -0.11
CNOT4O95628 MIR4321-201ENST00000592276 80 ntBASIC14.35□□□□□ -0.11
CNOT4O95628 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.35□□□□□ -0.11
CNOT4O95628 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.35□□□□□ -0.11
CNOT4O95628 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CNOT4O95628 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CNOT4O95628 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.35□□□□□ -0.11
CNOT4O95628 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNOT4O95628 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.35□□□□□ -0.11
CNOT4O95628 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.34□□□□□ -0.11
CNOT4O95628 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 AC236430.1-201ENST00000402231 743 ntBASIC14.34□□□□□ -0.11
CNOT4O95628 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.34□□□□□ -0.11
CNOT4O95628 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.34□□□□□ -0.11
CNOT4O95628 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.34□□□□□ -0.11
CNOT4O95628 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.34□□□□□ -0.11
CNOT4O95628 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.34□□□□□ -0.11
CNOT4O95628 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 MIR4453-201ENST00000584019 89 ntBASIC14.34□□□□□ -0.11
CNOT4O95628 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.34□□□□□ -0.11
CNOT4O95628 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.34□□□□□ -0.11
CNOT4O95628 AC003101.2-201ENST00000612557 442 ntBASIC14.34□□□□□ -0.11
CNOT4O95628 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CNOT4O95628 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CNOT4O95628 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 AL592424.1-201ENST00000563624 1536 ntBASIC14.34□□□□□ -0.11
CNOT4O95628 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNOT4O95628 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms