Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.83■□□□□ 0.77
SMARCA5O60264 AP001059.3-201ENST00000619053 235 ntBASIC19.83■□□□□ 0.77
SMARCA5O60264 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.83■□□□□ 0.76
SMARCA5O60264 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.83■□□□□ 0.76
SMARCA5O60264 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.83■□□□□ 0.76
SMARCA5O60264 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SMARCA5O60264 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.83■□□□□ 0.76
SMARCA5O60264 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.83■□□□□ 0.76
SMARCA5O60264 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.76
SMARCA5O60264 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCA5O60264 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SMARCA5O60264 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 AC092850.2-201ENST00000623821 2697 ntBASIC19.82■□□□□ 0.76
SMARCA5O60264 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCA5O60264 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCA5O60264 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.82■□□□□ 0.76
SMARCA5O60264 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.82■□□□□ 0.76
SMARCA5O60264 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCA5O60264 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.82■□□□□ 0.76
SMARCA5O60264 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.82■□□□□ 0.76
SMARCA5O60264 AL133215.2-201ENST00000609242 977 ntBASIC19.82■□□□□ 0.76
SMARCA5O60264 AC006538.3-201ENST00000612495 578 ntBASIC19.82■□□□□ 0.76
SMARCA5O60264 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCA5O60264 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.82■□□□□ 0.76
SMARCA5O60264 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SMARCA5O60264 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCA5O60264 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SMARCA5O60264 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCA5O60264 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SMARCA5O60264 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCA5O60264 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 LINC00554-201ENST00000564841 3011 ntBASIC19.81■□□□□ 0.76
SMARCA5O60264 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.81■□□□□ 0.76
SMARCA5O60264 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SMARCA5O60264 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SMARCA5O60264 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.81■□□□□ 0.76
SMARCA5O60264 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCA5O60264 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCA5O60264 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SMARCA5O60264 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.81■□□□□ 0.76
SMARCA5O60264 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCA5O60264 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 AC243562.2-201ENST00000561247 970 ntBASIC19.81■□□□□ 0.76
SMARCA5O60264 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 AC093028.1-201ENST00000622998 982 ntBASIC19.81■□□□□ 0.76
SMARCA5O60264 Z92544.3-201ENST00000624747 417 ntBASIC19.81■□□□□ 0.76
SMARCA5O60264 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCA5O60264 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCA5O60264 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCA5O60264 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SMARCA5O60264 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCA5O60264 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCA5O60264 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 AC011477.6-201ENST00000604980 1927 ntBASIC19.8■□□□□ 0.76
SMARCA5O60264 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCA5O60264 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCA5O60264 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SMARCA5O60264 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms