Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.98□□□□□ -0.01
PRKNO60260 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 AC100757.3-201ENST00000622361 1406 ntBASIC14.98□□□□□ -0.01
PRKNO60260 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PRKNO60260 AC134407.2-201ENST00000625089 1978 ntBASIC14.98□□□□□ -0.01
PRKNO60260 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PRKNO60260 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PRKNO60260 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PRKNO60260 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PRKNO60260 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
PRKNO60260 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
PRKNO60260 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.97□□□□□ -0.01
PRKNO60260 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.97□□□□□ -0.01
PRKNO60260 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.97□□□□□ -0.01
PRKNO60260 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.97□□□□□ -0.01
PRKNO60260 CETN4P-206ENST00000642099 2168 ntBASIC14.97□□□□□ -0.01
PRKNO60260 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.97□□□□□ -0.01
PRKNO60260 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.97□□□□□ -0.01
PRKNO60260 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.97□□□□□ -0.01
PRKNO60260 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.97□□□□□ -0.01
PRKNO60260 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PRKNO60260 UGT1A2P-201ENST00000454886 866 ntBASIC14.97□□□□□ -0.01
PRKNO60260 HLA-V-204ENST00000476601 1289 ntBASIC14.97□□□□□ -0.01
PRKNO60260 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.97□□□□□ -0.01
PRKNO60260 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.97□□□□□ -0.01
PRKNO60260 AL079307.3-201ENST00000556114 283 ntBASIC14.97□□□□□ -0.01
PRKNO60260 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.97□□□□□ -0.01
PRKNO60260 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.97□□□□□ -0.01
PRKNO60260 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.97□□□□□ -0.01
PRKNO60260 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.97□□□□□ -0.01
PRKNO60260 TEX28P1-201ENST00000613479 1221 ntBASIC14.97□□□□□ -0.01
PRKNO60260 TEX28P2-201ENST00000617764 1221 ntBASIC14.97□□□□□ -0.01
PRKNO60260 AL590560.3-201ENST00000623350 461 ntBASIC14.97□□□□□ -0.01
PRKNO60260 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.97□□□□□ -0.01
PRKNO60260 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.97□□□□□ -0.01
PRKNO60260 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 AL139384.1-201ENST00000612143 3047 ntBASIC14.97□□□□□ -0.01
PRKNO60260 CYP2T1P-202ENST00000641596 2535 ntBASIC14.97□□□□□ -0.01
PRKNO60260 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.97□□□□□ -0.01
PRKNO60260 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
PRKNO60260 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.97□□□□□ -0.01
PRKNO60260 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRKNO60260 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.96□□□□□ -0.01
PRKNO60260 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PRKNO60260 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PRKNO60260 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.96□□□□□ -0.01
PRKNO60260 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 AL080243.2-201ENST00000418783 582 ntBASIC14.96□□□□□ -0.01
PRKNO60260 TSSK5P-201ENST00000423978 907 ntBASIC14.96□□□□□ -0.01
PRKNO60260 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.96□□□□□ -0.01
PRKNO60260 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 BASP1P1-201ENST00000430708 665 ntBASIC14.96□□□□□ -0.01
PRKNO60260 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.96□□□□□ -0.01
PRKNO60260 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.96□□□□□ -0.01
PRKNO60260 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.96□□□□□ -0.01
PRKNO60260 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.96□□□□□ -0.01
PRKNO60260 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKNO60260 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.96□□□□□ -0.01
PRKNO60260 AC011467.4-201ENST00000594891 528 ntBASIC14.96□□□□□ -0.01
PRKNO60260 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms