Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
PDE6DO43924 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PDE6DO43924 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.53□□□□□ -0.4
PDE6DO43924 AL158047.1-201ENST00000445918 881 ntBASIC12.53□□□□□ -0.4
PDE6DO43924 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 AL355075.4-201ENST00000554988 638 ntBASIC12.53□□□□□ -0.4
PDE6DO43924 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.53□□□□□ -0.4
PDE6DO43924 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.53□□□□□ -0.4
PDE6DO43924 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.53□□□□□ -0.4
PDE6DO43924 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
PDE6DO43924 AC090616.6-201ENST00000582640 721 ntBASIC12.53□□□□□ -0.4
PDE6DO43924 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.53□□□□□ -0.4
PDE6DO43924 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.53□□□□□ -0.4
PDE6DO43924 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.53□□□□□ -0.4
PDE6DO43924 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.53□□□□□ -0.4
PDE6DO43924 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
PDE6DO43924 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.53□□□□□ -0.4
PDE6DO43924 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PDE6DO43924 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
PDE6DO43924 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 AC126365.1-201ENST00000578585 1514 ntBASIC12.52□□□□□ -0.4
PDE6DO43924 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.52□□□□□ -0.4
PDE6DO43924 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
PDE6DO43924 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
PDE6DO43924 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
PDE6DO43924 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.52□□□□□ -0.4
PDE6DO43924 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
PDE6DO43924 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.52□□□□□ -0.4
PDE6DO43924 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.4
PDE6DO43924 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
PDE6DO43924 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PDE6DO43924 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.52□□□□□ -0.41
PDE6DO43924 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
PDE6DO43924 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
PDE6DO43924 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.52□□□□□ -0.41
PDE6DO43924 VENTXP7-201ENST00000475503 772 ntBASIC12.52□□□□□ -0.41
PDE6DO43924 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.52□□□□□ -0.41
PDE6DO43924 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.52□□□□□ -0.41
PDE6DO43924 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.52□□□□□ -0.41
PDE6DO43924 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.52□□□□□ -0.41
PDE6DO43924 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.52□□□□□ -0.41
PDE6DO43924 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 KRT18P22-201ENST00000402024 1347 ntBASIC12.52□□□□□ -0.41
PDE6DO43924 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 SIGLEC16-201ENST00000599858 1437 ntBASIC12.52□□□□□ -0.41
PDE6DO43924 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
PDE6DO43924 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.52□□□□□ -0.41
PDE6DO43924 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PDE6DO43924 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms