Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CREB3O43889 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.86■□□□□ 0.29
CREB3O43889 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.86■□□□□ 0.29
CREB3O43889 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.86■□□□□ 0.29
CREB3O43889 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.86■□□□□ 0.29
CREB3O43889 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.86■□□□□ 0.29
CREB3O43889 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.86■□□□□ 0.29
CREB3O43889 AC098859.1-201ENST00000502915 1238 ntBASIC16.86■□□□□ 0.29
CREB3O43889 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 SLC25A39P2-201ENST00000537614 270 ntBASIC16.86■□□□□ 0.29
CREB3O43889 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 KRT8P23-201ENST00000560090 1207 ntBASIC16.86■□□□□ 0.29
CREB3O43889 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.86■□□□□ 0.29
CREB3O43889 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 AC134684.3-201ENST00000641758 218 ntBASIC16.86■□□□□ 0.29
CREB3O43889 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CREB3O43889 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.86■□□□□ 0.29
CREB3O43889 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CREB3O43889 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CREB3O43889 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.86■□□□□ 0.29
CREB3O43889 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CREB3O43889 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CREB3O43889 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CREB3O43889 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.85■□□□□ 0.29
CREB3O43889 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.85■□□□□ 0.29
CREB3O43889 LINC02228-204ENST00000642115 2962 ntBASIC16.85■□□□□ 0.29
CREB3O43889 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.85■□□□□ 0.29
CREB3O43889 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CREB3O43889 MIR346-201ENST00000362234 95 ntBASIC16.85■□□□□ 0.29
CREB3O43889 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CREB3O43889 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 RPS8P6-201ENST00000426177 609 ntBASIC16.85■□□□□ 0.29
CREB3O43889 AP000344.2-201ENST00000512987 629 ntBASIC16.85■□□□□ 0.29
CREB3O43889 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.85■□□□□ 0.29
CREB3O43889 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 AL596442.2-201ENST00000610240 980 ntBASIC16.85■□□□□ 0.29
CREB3O43889 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CREB3O43889 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CREB3O43889 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.85■□□□□ 0.29
CREB3O43889 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 C8orf49-201ENST00000525043 1968 ntBASIC16.84■□□□□ 0.29
CREB3O43889 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CREB3O43889 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.84■□□□□ 0.29
CREB3O43889 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CREB3O43889 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms