Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2AO43633 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.08■□□□□ 0.49
CHMP2AO43633 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.08■□□□□ 0.49
CHMP2AO43633 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2AO43633 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.08■□□□□ 0.49
CHMP2AO43633 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMP2AO43633 AC124067.4-201ENST00000519691 2379 ntBASIC18.08■□□□□ 0.48
CHMP2AO43633 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CHMP2AO43633 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMP2AO43633 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.08■□□□□ 0.48
CHMP2AO43633 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMP2AO43633 AC243562.2-201ENST00000561247 970 ntBASIC18.08■□□□□ 0.48
CHMP2AO43633 AJ011932.1-201ENST00000621707 465 ntBASIC18.08■□□□□ 0.48
CHMP2AO43633 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CHMP2AO43633 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2AO43633 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMP2AO43633 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP2AO43633 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 KRT8P12-202ENST00000472924 1397 ntBASIC18.07■□□□□ 0.48
CHMP2AO43633 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2AO43633 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2AO43633 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 RN7SL618P-201ENST00000477850 296 ntBASIC18.07■□□□□ 0.48
CHMP2AO43633 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.07■□□□□ 0.48
CHMP2AO43633 AL512361.1-201ENST00000554200 418 ntBASIC18.07■□□□□ 0.48
CHMP2AO43633 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.07■□□□□ 0.48
CHMP2AO43633 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 AC092364.2-202ENST00000597012 1073 ntBASIC18.07■□□□□ 0.48
CHMP2AO43633 AL844908.2-201ENST00000609461 460 ntBASIC18.07■□□□□ 0.48
CHMP2AO43633 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CHMP2AO43633 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.07■□□□□ 0.48
CHMP2AO43633 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 BNIP3P1-202ENST00000550043 1585 ntBASIC18.07■□□□□ 0.48
CHMP2AO43633 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHMP2AO43633 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHMP2AO43633 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHMP2AO43633 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.06■□□□□ 0.48
CHMP2AO43633 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2AO43633 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.06■□□□□ 0.48
CHMP2AO43633 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHMP2AO43633 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHMP2AO43633 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2AO43633 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CHMP2AO43633 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 SPDYE17-201ENST00000412399 783 ntBASIC18.06■□□□□ 0.48
CHMP2AO43633 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2AO43633 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2AO43633 MIR4745-201ENST00000577608 62 ntBASIC18.06■□□□□ 0.48
CHMP2AO43633 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2AO43633 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2AO43633 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.06■□□□□ 0.48
CHMP2AO43633 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.06■□□□□ 0.48
CHMP2AO43633 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CHMP2AO43633 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHMP2AO43633 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2AO43633 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2AO43633 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2AO43633 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2AO43633 AC022144.1-201ENST00000602255 1580 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms