Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ATP2A1O14983 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A1O14983 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ATP2A1O14983 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATP2A1O14983 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATP2A1O14983 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP2A1O14983 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2A1O14983 TARDBPP1-201ENST00000442013 1203 ntBASIC18.33■□□□□ 0.52
ATP2A1O14983 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP2A1O14983 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2A1O14983 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP2A1O14983 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2A1O14983 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2A1O14983 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP2A1O14983 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
ATP2A1O14983 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ATP2A1O14983 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A1O14983 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP2A1O14983 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 CDC14C-201ENST00000428251 1719 ntBASIC18.32■□□□□ 0.52
ATP2A1O14983 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A1O14983 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A1O14983 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A1O14983 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A1O14983 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2A1O14983 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2A1O14983 TTTY23B-201ENST00000442790 549 ntBASIC18.32■□□□□ 0.52
ATP2A1O14983 ACA64.2-201ENST00000459014 129 ntBASIC18.32■□□□□ 0.52
ATP2A1O14983 AC104596.2-201ENST00000512793 793 ntBASIC18.32■□□□□ 0.52
ATP2A1O14983 HILS1-202ENST00000545329 423 ntBASIC18.32■□□□□ 0.52
ATP2A1O14983 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2A1O14983 AL158212.4-201ENST00000624062 1286 ntBASIC18.32■□□□□ 0.52
ATP2A1O14983 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A1O14983 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A1O14983 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A1O14983 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A1O14983 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2A1O14983 AC106886.4-201ENST00000623557 2502 ntBASIC18.31■□□□□ 0.52
ATP2A1O14983 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A1O14983 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2A1O14983 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A1O14983 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2A1O14983 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A1O14983 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 TOMM22P5-201ENST00000416399 439 ntBASIC18.31■□□□□ 0.52
ATP2A1O14983 AC007274.1-201ENST00000439805 662 ntBASIC18.31■□□□□ 0.52
ATP2A1O14983 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 AC007389.4-201ENST00000454674 793 ntBASIC18.31■□□□□ 0.52
ATP2A1O14983 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A1O14983 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A1O14983 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A1O14983 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A1O14983 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A1O14983 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A1O14983 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms