Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC21.12■□□□□ 0.97
APAF1O14727 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
APAF1O14727 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
APAF1O14727 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC21.11■□□□□ 0.97
APAF1O14727 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.11■□□□□ 0.97
APAF1O14727 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
APAF1O14727 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
APAF1O14727 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.11■□□□□ 0.97
APAF1O14727 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.11■□□□□ 0.97
APAF1O14727 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
APAF1O14727 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
APAF1O14727 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
APAF1O14727 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
APAF1O14727 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 RFPL4AP1-201ENST00000530883 850 ntBASIC21.11■□□□□ 0.97
APAF1O14727 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.11■□□□□ 0.97
APAF1O14727 AL390955.2-201ENST00000603032 514 ntBASIC21.11■□□□□ 0.97
APAF1O14727 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
APAF1O14727 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
APAF1O14727 CETN4P-206ENST00000642099 2168 ntBASIC21.11■□□□□ 0.97
APAF1O14727 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
APAF1O14727 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.1■□□□□ 0.97
APAF1O14727 WARS-232ENST00000556645 2508 ntTSL 5 BASIC21.1■□□□□ 0.97
APAF1O14727 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 AC067863.1-201ENST00000494933 530 ntBASIC21.1■□□□□ 0.97
APAF1O14727 AC069120.2-201ENST00000524091 540 ntBASIC21.1■□□□□ 0.97
APAF1O14727 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
APAF1O14727 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
APAF1O14727 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.1■□□□□ 0.97
APAF1O14727 TEX28P1-201ENST00000613479 1221 ntBASIC21.1■□□□□ 0.97
APAF1O14727 TEX28P2-201ENST00000617764 1221 ntBASIC21.1■□□□□ 0.97
APAF1O14727 HLA-DQB2-231ENST00000435145 2026 ntBASIC21.1■□□□□ 0.97
APAF1O14727 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC21.1■□□□□ 0.97
APAF1O14727 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APAF1O14727 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
APAF1O14727 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.09■□□□□ 0.97
APAF1O14727 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.09■□□□□ 0.97
APAF1O14727 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
APAF1O14727 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.09■□□□□ 0.97
APAF1O14727 MIR943-201ENST00000401286 94 ntBASIC21.09■□□□□ 0.97
APAF1O14727 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.09■□□□□ 0.97
APAF1O14727 HLA-V-204ENST00000476601 1289 ntBASIC21.09■□□□□ 0.97
APAF1O14727 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.09■□□□□ 0.97
APAF1O14727 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.09■□□□□ 0.97
APAF1O14727 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.09■□□□□ 0.97
APAF1O14727 MIR4313-201ENST00000580760 101 ntBASIC21.09■□□□□ 0.97
APAF1O14727 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.09■□□□□ 0.97
APAF1O14727 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.09■□□□□ 0.97
APAF1O14727 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 AC073592.8-201ENST00000624126 511 ntBASIC21.09■□□□□ 0.97
APAF1O14727 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
APAF1O14727 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
APAF1O14727 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC21.09■□□□□ 0.97
APAF1O14727 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.08■□□□□ 0.97
APAF1O14727 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
APAF1O14727 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.08■□□□□ 0.97
APAF1O14727 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.08■□□□□ 0.97
APAF1O14727 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
APAF1O14727 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
APAF1O14727 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
APAF1O14727 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
APAF1O14727 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.08■□□□□ 0.97
APAF1O14727 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms