Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 ALOX12P2-203ENST00000570921 1945 ntBASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 MFF-205ENST00000354503 1085 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 MCCD1P1-208ENST00000445732 328 ntBASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 AC124947.2-201ENST00000547118 1133 ntBASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 PLD4-205ENST00000553861 667 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 AL035685.1-201ENST00000636663 812 ntBASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 AC010491.1-201ENST00000563101 2797 ntBASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC8.9□□□□□ -0.98
CHKB-CPT1BH3BT56 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 NBN-203ENST00000409330 4523 ntTSL 5 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 AC106818.1-201ENST00000623223 3242 ntBASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 EDA-201ENST00000338901 1233 ntBASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 AC027612.3-201ENST00000413684 1047 ntBASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms