Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 AJ011932.1-201ENST00000621707 465 ntBASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 AP003680.1-201ENST00000598970 3660 ntBASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YJEFN3A6XGL0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 CROCCP1-201ENST00000426910 5675 ntBASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 PHKG1P2-201ENST00000457537 863 ntBASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 ZNF890P-202ENST00000530367 1156 ntBASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 AC044860.1-202ENST00000559481 777 ntBASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 AC008738.7-201ENST00000609744 511 ntBASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
YJEFN3A6XGL0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
YJEFN3A6XGL0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
YJEFN3A6XGL0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
YJEFN3A6XGL0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
YJEFN3A6XGL0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
YJEFN3A6XGL0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
YJEFN3A6XGL0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms